lecture16 fin, 18 init

2016-09-24-lecture02.md

@@ -9,6 +9,8 @@ Last time we learned some of the basic cellular anatomy of the nervous system. T
 
 First of all it is a system of systems. In other words…
 
+TODO: exchange pngs for jpgs in this document
+
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 ## Major components of the nervous system and their functional relationships
@@ -416,11 +418,11 @@ Note:
 
 substantia nigra pars compacta, a nucleus containing neurons making the neurotransmitter dopamine that are important for regulating motor movements via their connections with the basal ganglia and which are devastated in parkinson’s disease.
 
-Now you’ve all heard the phrase ‘running around like a chicken with its head cut off’ —>
-
 *dark appearance due to high levels of dark pigment neuromelanin in dopaminergic neurons*  
 *Neuromelanin is directly biosynthesized from L-DOPA, precursor to dopamine, by tyrosine hydroxylase (TH)*  
 
+Now you’ve all heard the phrase ‘running around like a chicken with its head cut off’ —>
+
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 ## The brainstem is all you need to live
@@ -635,12 +637,11 @@ Note:
 
 <div style="margin-bottom:50px"><figcaption class="big">Fiber stain</figcaption><img src="figs/2240_fiber_d16bc49.jpg" height="200px"><figcaption>[Brain Biodiversity Bank MSU, NSF](https://msu.edu/~brains/brains/human/coronal/montage.html)</figcaption></div>
 
-<div><figcaption class="big">Dorsal view</figcaption><img src="figs/Neuroscience5e-Fig-A11-1R_a8973d9.png" height="200px"><figcaption>Neuroscience 5e Fig. A11</figcaption></div>
+<div><figcaption class="big">Dorsal view</figcaption><img src="figs/Neuroscience5e-Fig-A11-1R_a8973d9_copy_9c648a7.jpg" height="200px"><figcaption>Neuroscience 5e Fig. A11</figcaption></div>
 
-<div><figcaption class="big">Dorsal view cut away</figcaption><img src="figs/Neuroscience5e-Fig-A11-3R_17d31f5.png" height="200px"><figcaption>Neuroscience 5e Fig. A11</figcaption></div> <!-- .element: class="fragment fade-in"-->
+<div><figcaption class="big">Dorsal view cut away</figcaption><img src="figs/Neuroscience5e-Fig-A11-3R_17d31f5_copy_406b96a.jpg" height="200px"><figcaption>Neuroscience 5e Fig. A11</figcaption></div> <!-- .element: class="fragment fade-in"-->
-
-<div><figcaption class="big">MRI-DTI dorsal projection</figcaption><img src="figs/Neuroscience5e-Ch01-Opener_497d461.png" height="200px"><figcaption>Neuroscience 5e</figcaption></div> <!-- .element: class="fragment fade-in"-->
 
+<div><figcaption class="big">MRI-DTI dorsal projection</figcaption><img src="figs/Neuroscience5e-Ch01-Opener_497d461_copy_b20f743.jpg" height="200px"><figcaption>Neuroscience 5e</figcaption></div> <!-- .element: class="fragment fade-in"-->
 
 Note:
 
@@ -681,7 +682,7 @@ anterior commisure
 
 </div>
 
-<div style="padding:0 50px;"><img src="figs/Neuroscience5e-Fig-26.01-0_9acbc74.png" height="200px"><figcaption>Neuroscience 5e Fig. 26.1</figcaption></div>
+<div style="padding:0 50px;"><img src="figs/Neuroscience5e-Fig-26.01-0_copy_c5817b1.jpg" height="200px"><figcaption>Neuroscience 5e Fig. 26.1</figcaption></div>
 
 Note:
 
@@ -689,7 +690,7 @@ Note:
 
 ## Brain organization summary
 
-<div><img src="figs/Neuroscience5e-Fig-A12-1R_094c533.png" height="315px"><figcaption>Neuroscience 5e Fig. A12</figcaption></div>
+<div><img src="figs/Neuroscience5e-Fig-A12-1R_copy_020ed62.jpg" height="315px"><figcaption>Neuroscience 5e Fig. A12</figcaption></div>
 
 <div><iframe src="https://www.youtube.com/embed/snO68aJTOpM" width="420" height="315"></iframe><figcaption>Pinky and the Brain</figcaption></div>
 
@@ -720,7 +721,7 @@ Note:
 
 <div><figcaption>Cells</figcaption><img src="figs/image17_f4be687.png" height="300px"><figcaption></figcaption></div>
 
-<div><figcaption>Cells & fibers</figcaption><img src="figs/The_Cerebral_Neocortex_Jones-fig3-Meynert-1884_0f72f1d.png" height="300px"><figcaption>Meynert 1884</figcaption></div>
+<div><figcaption>Cells & fibers</figcaption><img src="figs/The_Cerebral_Neocortex_Jones-fig3-Meynert-1884_copy_fed3654.jpg" height="300px"><figcaption>Meynert 1884</figcaption></div>
 
 <div><figcaption>Golgi stain</figcaption><img src="figs/The_Cerebral_Neocortex_Eccles-fig4-Jones-1981_f8dc197.png" height="300px"><figcaption>Jones 1981</figcaption></div>
 
@@ -746,7 +747,7 @@ Note:
 
 </div>
 
-<div style="padding:0 50px;"><img src="figs/Walsh-curr-opin-gen-dev-2002-fig2_798163d.png" height="500px"><figcaption>Olson and Walsh, 2002 Fig. 2</figcaption></div>
+<div style="padding:0 50px;"><img src="figs/Walsh-curr-opin-gen-dev-2002-fig2_798163d_copy_878c80b.jpg" height="500px"><figcaption>Olson and Walsh, 2002 Fig. 2</figcaption></div>
 
 
 Note:
@@ -825,7 +826,7 @@ He used cell body staining like the Nissl stain to examine differences in genera
 
 ## Brodmann areas
 
-<div><img src="figs/5892_Fig4_3c30913.png" height="300px"><figcaption>Brodmann 1909</figcaption></div>
+<div><img src="figs/5892_Fig4_3c30913_copy_40d8d23.jpg" height="300px"><figcaption>Brodmann 1909</figcaption></div>
 <div><img src="figs/brodmann-color-crop_81018e1.png" height="300px"><figcaption>Brodmann 1909 color</figcaption></div>
 
 
@@ -880,7 +881,9 @@ Note:
 
 ## Major brain areas involved in the comprehension and production of language
 
-<div><img src="figs/Neuroscience5e-Fig-27.01-0_eaf66c7.png" height="400px"><figcaption>Neuroscience 5e Fig. 27.1</figcaption></div>
+<div><img src="figs/Neuroscience5e-Fig-27.01-0_eaf66c7_copy_1841ced.jpg" height="400px"><figcaption>Neuroscience 5e Fig. 27.1</figcaption></div>
+
+
 
 Note:
 
@@ -891,7 +894,7 @@ Note:
 
 ## Characteristics of Broca's and Wernicke's aphasias
 
-<div><img src="figs/Neuroscience5e-Tab-27.01-0_859de7f.png" height="300px"><figcaption>Neuroscience 5e Table 27.1</figcaption></div>
+<div><img src="figs/Neuroscience5e-Tab-27.01-0_859de7f_copy_4abca30.jpg" height="300px"><figcaption>Neuroscience 5e Table 27.1</figcaption></div>
 
 
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@@ -1006,8 +1009,7 @@ And since each side of the brain to some degree can work independently of the ot
 
 ## Confirmation of hemispheric specialization for language
 
-<div><img src="figs/Neuroscience5e-Fig-27_split-brain_ecd6046.png" height="500px"><figcaption>Neuroscience 5e Fig. 27.3</figcaption></div>
+<div><img src="figs/Neuroscience5e-Fig-27_split-brain_copy_8719b7e.jpg" height="500px"><figcaption>Neuroscience 5e Fig. 27.3</figcaption></div>
-
 
 
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@@ -1047,7 +1049,8 @@ Babbling sounds from a baby shows that there is a pattern of sounds produced seq
 
 ## Mapping brain activity with fMRI
 
-<figure><img src="figs/Neuroscience5e-Fig-27.06-0_2687612.png" height="400px"><figcaption>Neuroscience 5e Fig. 27.6</figcaption></figure>
+<figure><img src="figs/Neuroscience5e-Fig-27.06-0_2687612_copy_718a9bc.jpg" height="400px"><figcaption>Neuroscience 5e Fig. 27.6</figcaption></figure>
+
 
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2016-11-03-extra.md

@@ -1,3 +1,11 @@
+## Cerebral circulation
+<figure><img src="figs/Neuroscience5e-Fig-A17-1R_copy_6202d42.jpg" height="100px"><figcaption>Neuroscience 5e Fig. A17</figcaption></figure>
+<figure><img src="figs/Neuroscience5e-Fig-A17-2R_copy_b967242.jpg" height="100px"><figcaption>Neuroscience 5e Fig. A17</figcaption></figure>
+<figure><img src="figs/Neuroscience5e-Fig-A17-3R_copy_ee1678b.jpg" height="100px"><figcaption>Neuroscience 5e Fig. A17</figcaption></figure>
+<figure><img src="figs/Neuroscience5e-Fig-A17-4R_copy_5c0e719.jpg" height="100px"><figcaption>Neuroscience 5e Fig. A17</figcaption></figure>
+<figure><img src="figs/Neuroscience5e-Fig-A18-0_fbf5fa5.jpg" height="100px"><figcaption>Neuroscience 5e Fig. A18</figcaption></figure>
+
+
 
 ## Brain damage and visual perception